Although Sudan lies within the tropics, the climate ranges from arid in the north to tropical wet-and-dry in the far southwest. Temperatures do not vary greatly with the season at any location; the most significant climatic variables are rainfall and the length of the dry season. Variations in the length of the dry season depend on which of two air flows predominates, dry northeasterly winds from the Arabian Peninsula or moist southwesterly winds from the Congo River basin.

From January to March, the country is under the influence of the dry northeasterlies. There is practically no rainfall countrywide except for a small area in northwestern Sudan in where the winds have passed over the Mediterranean bringing occasional light rains. By early April, the moist southwesterlies have reached southern Sudan, bringing heavy rains and thunderstorms. By July the moist air has reached Khartoum, and in August it extends to its usual northern limits around Abu Hamad, although in some years the humid air may even reach the Egyptian border. The flow becomes weaker as it spreads north. In September the dry northeasterlies begin to strengthen and to push south and by the end of December they cover the entire country. Yambio, close to the border with Zaire, has a nine-month rainy season (April-December) and receives an average of 1,142 millimeters of rain each year; Khartoum has a three-month rainy season (JulySeptember ) with an annual average rainfall of 161 millimeters; Atbarah receives showers in August that produce an annual average of only 74 millimeters.

In some years, the arrival of the southwesterlies and their rain in central Sudan can be delayed, or they may not come at all. If that happens, drought and famine follow. The decades of the 1970s and 1980s saw the southwesterlies frequently fail, with disastrous results for the Sudanese people and economy.

Temperatures are highest at the end of the dry season when cloudless skies and dry air allow them to soar. The far south, however, with only a short dry season, has uniformly high temperatures throughout the year. In Khartoum, the warmest months are May and June, when average highs are 41° C and temperatures can reach 48° C. Northern Sudan, with its short rainy season, has hot daytime temperatures year round, except for winter months in the northwest where there is precipitation from the Mediterranean in January and February. Conditions in highland areas are generally cooler, and the hot daytime temperatures during the dry season throughout central and northern Sudan fall rapidly after sunset. Lows in Khartoum average 15° C in January and have dropped as low as 6° C after the passing of a cool front in winter.

The haboob, a violent dust storm, can occur in central Sudan when the moist southwesterly flow first arrives (May through July). The moist, unstable air forms thunderstorms in the heat of the afternoon. The initial downflow of air from an approaching storm produces a huge yellow wall of sand and clay that can temporarily reduce visibility to zero.

Data as of 1991